Occurrence record: DNA Laboratory:Z10529

Material Sample of Plagiogeneion rubiginosum (Hutton, 1875) | Cosmopolitan Rubyfish recorded on 2003-05-11

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z10529
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z10529
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Tissue\|Frozen\|ethanol 95%\|Gill arch/es, Muscle\|ethanol 96%\|-196°C
Identified by	Dr Clive D. Roberts - Museum of New Zealand Te Papa Tongarewa (NMNZ)
Collector	1. Bray, J. Dianne 2. Museums Victoria 3. Norfanz, Team Supplied as "Dianne J. Bray - Museums Victoria \| NORFANZ team"
Sex	Unknown
Individual count	1
Associated Occurrence Status	Representative record
Associated occurrences	This record has 1 inferred associated occurrences For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Ichthyology:PreservedSpecimen:A25100-3
Field Number	TAN0308-001
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Relationship of resource	same individual
Owner institution code	NMV
Sampling protocol	[trawl, orange roughy]
Associated records	REPRESENTATIVE
Dataset / Survey name	[NORFANZ]
Disposition	In collection
Date identified	2003-05-11 Supplied as 11/05/2003

Event

Dataset / Survey name	NORFANZ
Event ID	TAN0308-001
Field Number	TAN0308-001
Occurrence date	2003-05-11 Supplied date "2003-05-11T13:49:00\2003-05-11T14:19:00"
Sampling protocol	trawl, orange roughy
Date precision	DAY
Event time	13:49:00\14:19:00

Taxonomy

Higher classification	Animalia \| Chordata \| Craniata \| Gnathostomata \| Actinopterygii \| Perciformes \| Emmelichthyidae
Scientific name	Plagiogeneion rubiginosum
Identified to rank	species
Common name	Cosmopolitan Rubyfish
Kingdom	Animalia
Phylum	Chordata
Class	Actinopterygii
Order	Perciformes
Family	Emmelichthyidae
Genus	Plagiogeneion
Species	Plagiogeneion rubiginosum
Name match metric	exactMatch
Scientific name authorship	(Hutton, 1875)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Higher geography	Tasman Sea \| New Zealand
Country	New Zealand
Locality	South Norfolk Ridge, off the Three Kings Islands
Latitude	-34.1114 Supplied as: "-34.1114"
Longitude	171.661 Supplied as: "171.661"
Datum	EPSG:4326 Supplied datum: "WGS84"
Verbatim locality	South Norfolk Ridge, off the Three Kings Islands
Water body	Tasman Sea
Minimum depth in metres	351
Maximum depth in metres	400
Coordinate precision	Unknown
Georeference protocol	original
Terrestrial	false
Biome	MARINE
Marine	true
Country Code	NZ

Additional properties

blocked	Available for loan
material sample type	Tissue
preparation materials	ethanol 95% \| ethanol 96%
preparation type	Gill arch/es, Muscle
preservation temperature	-196°C
preservation type	ethanol 95% \| ethanol 96%

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Recorded date invalid	Warning
Show/Hide 102 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Min and max depth reversed	Passed
Depth value non-numeric	Passed
Depth value supplied in feet	Passed
Depth unlikely	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identified date invalid	Passed
Identified date unlikely	Passed
Identification date before occurrence date	Passed
Individual count conflicts with occurrence status	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeference protocol	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 4 missing properties
Missing georeferenced by	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 16 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record has been identified as the representative occurrence in a group of associated occurrences. This mean other records have been detected that seem to relate to this record and this particular record has the most detailed information on the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	aa5a2141-072d-4606-89a1-17eb2aaac439
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Plagiogeneion rubiginosum
Coordinates	-34.1114,171.661
Related records
Record UUID	e2b2c817-d217-468d-bffc-18e14f1c64e3
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Plagiogeneion rubiginosum
Coordinates	-34.1114,171.661
Record UUID	ff47eecb-177f-461c-9e22-bd94b6d89bb1
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Plagiogeneion rubiginosum
Coordinates	-34.1114,171.661
Record UUID	c342a0ea-230e-42b7-b625-3459569a422e
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Plagiogeneion rubiginosum
Coordinates	-34.1114,171.661

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Plagiogeneion rubiginosum	Plagiogeneion rubiginosum
	Match type		exactMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/ab01803c-6549-4d7e-b8af-aa2a740db510
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/dd1d7b82-4d2a-44c8-a96c-c3874c216ec8
	Order	Perciformes	Perciformes
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/dd1d7b82-4d2a-44c8-a96c-c3874c216ec8
	Genus	Plagiogeneion	Plagiogeneion
	Left		44918
	Higher classification	Animalia \| Chordata \| Craniata \| Gnathostomata \| Actinopterygii \| Perciformes \| Emmelichthyidae
	Scientific name authorship		(Hutton, 1875)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/f3ff22e1-7a12-4654-a4a4-764a34d458fa
	Name type		SCIENTIFIC
	Vernacular name	Cosmopolitan Rubyfish	Cosmopolitan Rubyfish
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/e3fda0ff-4705-4a40-8991-1dfabdadcfae
	Right		44918
	Kingdom	Animalia	Animalia
	Specific epithet	rubiginosum
	Class id		https://biodiversity.org.au/afd/taxa/83e82cc3-be4e-40e8-9e7a-985737c4f726
	Phylum	Chordata	Chordata
	Class	Actinopterygii	Actinopterygii
	Species		Plagiogeneion rubiginosum
	Family	Emmelichthyidae	Emmelichthyidae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Event ID	TAN0308-001
	Year	2003	2003
	Dataset / Survey name	[NORFANZ]
	Month	5	5
	Date precision		DAY
	Event time	13:49:00\14:19:00
	Day	11	11
	Event date	2003-05-11T13:49:00\2003-05-11T14:19:00	2003-05-11
Identification	Date identified	11/05/2003	2003-05-11
Identification	Identified by	[Dr Clive D. Roberts - Museum of New Zealand Te Papa Tongarewa (NMNZ)]
Occurrence	Associated occurrences		019dd5cf-cdea-4eff-b3f6-2bf39192404c
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Individual count	1	1
	Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Ichthyology:PreservedSpecimen:A25100-3
	Duplication status		R
	Field number	TAN0308-001
	Language	en
	Type		PhysicalObject
	Catalog number	Z10529
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2020-10-01T19:53:00	2020-10-01T19:53
	Relationship of resource	same individual
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z10529
	Owner institution code	NMV
	Sampling protocol	[trawl, orange roughy]
	Preparations	Tissue\|Frozen\|ethanol 95%\|Gill arch/es, Muscle\|ethanol 96%\|-196°C
	Duplicate status		REPRESENTATIVE
	Institution code	NMV
	Sex	Unknown
	Dataset / Survey name	[NORFANZ]
	Disposition	In collection
	Recorded by	Dianne J. Bray - Museums Victoria \| NORFANZ team	[Bray, J. Dianne, Museums Victoria, Norfanz, Team]
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	New Zealand	New Zealand
	Decimal latitude	-34.1114	-34.1114
	Terrestrial	false	false
	Maximum depth in meters	400	400.0
	Higher geography	Tasman Sea \| New Zealand
	Locality	South Norfolk Ridge, off the Three Kings Islands	South Norfolk Ridge, off the Three Kings Islands
	Decimal longitude	171.661	171.661
	Verbatim locality	South Norfolk Ridge, off the Three Kings Islands
	Biome		MARINE
	Marine	true	true
	Minimum depth in meters	351	351.0
	Country code		NZ
	Georeference protocol	original
	Geodetic datum	WGS84	EPSG:4326
	Water body	Tasman Sea	Tasman Sea

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