Occurrence record: DNA laboratory:Z77123

Material Sample of Rattus rattus (Linnaeus, 1758) | Black Rat recorded on 2022-10-18

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA laboratory"
Catalog number	Z77123
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA laboratory:MaterialSample:Z77123
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	cell\|Frozen\|Cryopreservation medium\|Cell\|-196°C
Identified by	Dr Kevin C. Rowe - Museums Victoria
Collector	Dr Kevin C. Rowe - Museums Victoria
Sex	Unknown
Life stage	Adult
Associated Occurrence Status	Associated record
Associated occurrences	The occurrence is associated with a representative record. For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Field Number	Grampians2021_0022
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Owner institution code	NMV
Associated records	ASSOCIATED
Disposition	In collection

Event

Event ID	Grampians2021_0022
Field Number	Grampians2021_0022
Occurrence date	2022-10-18 Supplied date "2022-10-18T00:00:00\2022-10-18T00:00:00"
End day of year	291
Date precision	DAY
Start day of year	291

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
Scientific name	Rattus rattus Supplied scientific name "Rattus rattus (Linnaeus, 1758)"
Identified to rank	species
Common name	Black Rat
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus rattus
Name match metric	exactMatch
Scientific name authorship	(Linnaeus, 1758)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Country	Australia
State or Territory	Victoria
Locality	Grampians National Park, Victoria Range Track, 2.4km by road E of intersection with Sawmill Track
Latitude	-37.3405 Supplied as: "-37.3405"
Longitude	142.302 Supplied as: "142.302"
Datum	EPSG:4326 Supplied datum: "GDA94"
Verbatim locality	Grampians National Park, Victoria Range Track, 2.4km by road E of intersection with Sawmill Track
Min elevation	415
Max elevation	416
Coordinate precision	Unknown
Georeference sources	Collector
Georeference protocol	GARMIN GPSmap 62s
Terrestrial	true
Biome	TERRESTRIAL
Marine	false
Country Code	AU
Location ID	VR01

Additional properties

material sample type	Tissue
preparation materials	Cryopreservation medium
preparation type	Cell
prepared by	Jennifer Hetz Rodriguez - Museums Victoria
preservation date begin	2022-10-21T00:00:00
preservation temperature	-196°C
preservation type	Cryopreservation medium

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Recorded date invalid	Warning
Show/Hide 100 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
Min and max altitude reversed	Passed
Altitude value non-numeric	Passed
Altitude value supplied in feet	Passed
Elevation unlikely	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeferenced by	Passed
Missing georeference protocol	Passed
Missing georeference sources	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 2 missing properties
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 20 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Individual count invalid	Unchecked (lack of data)
Individual count conflicts with occurrence status	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record is associated with the representative record. This mean another record has been detected to be similar to this record, and that the other record (the representative record) has the most detailed information for the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	22174c84-41b8-4115-8e98-03c97e836ad1
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Related records
Record UUID	2c83ec9f-56a0-44f7-ae9c-891075c8b4cb
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Record UUID	be4daaca-81a4-479d-a33e-e8fb0c413270
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Record UUID	d2579ad4-8d21-49a9-8cac-5f72c887cff8
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Record UUID	982f5d74-13ff-4375-addc-a05108b15008
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Record UUID	ccecceb0-8f46-42cc-a036-dc6bbb676588
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Record UUID	7b0fb2c9-866f-49af-9750-9abe9d5d9ea0
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Record UUID	fb965b64-1229-4910-b87b-0a922f55eade
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302
Record UUID	40a6ac59-c1d7-48d1-bf08-2198991d6214
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus rattus (Linnaeus, 1758)
Coordinates	-37.3405,142.302

Additional political boundaries information

Area Management
CAPAD 2016 Terrestrial	Victoria Range
CAPAD 2020 Terrestrial	Victoria Range
CAPAD 2022 - Terrestrial (Collaborative Australian Protected Areas Database)	Grampians
GER Central Victorial Biolinks	GER Central Victorial Biolinks
GER National Corridor	GER National Corridor
Great Eastern Ranges Initiative	GER Great Eastern Ranges Initiative
IBRA (Interim Biogeographic Regionalisation for Australia (IBRA) Version 7 (Regions)	Victorian Midlands
IBRA (Interim Biogeographic Regionalisation for Australia (IBRA) Version 7 (Subregions), contextual (polygon)	Greater Grampians
NRM Regions 2010	Glenelg Hopkins
NRM Regions 2017	Glenelg Hopkins
Area management
National Landcare Program Management Units 2018	Glenelg Hopkins
Biodiversity
IBRA 6 Regions	Victorian Midlands
IBRA 7 Regions	Victorian Midlands
IBRA 7 Subregions	Greater Grampians
Hydrology
Drainage Divisions Level 1	South East Coast (Victoria)
Drainage Divisions Level 2	GLENELG RIVER
Marine
States including coastal waters	Victoria (including Coastal Waters)
Political
ASGS Australian States and Territories	Victoria
Australian States and Territories	Victoria
Local Government Areas 2011	Southern Grampians (S)
Local Government Areas 2012 deprecated	S. Grampians Bal
Local Government Areas PSMA 2018	SOUTHERN GRAMPIANS SHIRE
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	26
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	721
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF VIC.
PSMA ABS SA2 Statistical Areas (2016)	SOUTHERN GRAMPIANS
PSMA ABS SA3 Statistical Areas (2016)	GLENELG - SOUTHERN GRAMPIANS
PSMA ABS SA4 Statistical Areas (2016)	WARRNAMBOOL AND SOUTH WEST
PSMA Commonwealth Electoral Boundaries (2018)	WANNON
PSMA Indigenous Areas (2016)	SOUTHERN GRAMPIANS - GLENELG
PSMA Indigenous Locations (2016)	SOUTHERN GRAMPIANS
PSMA Indigenous Regions (2016)	VICTORIA EXC. MELBOURNE
PSMA Remoteness Areas (2016)	Outer Regional Australia
PSMA State Electoral Boundaries (2018)	LOWAN
PSMA States (2016)	VICTORIA
World Country Boundaries	Australia
Social
Local Government Areas 2023	Southern Grampians
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Non-Indigenous, Native forest
Forests of Australia (2013) v2.0	Eucalypt Medium Open
Forests of Australia 2018B	Eucalypt Medium Open
NVIS 4.1 Major Vegetation Groups	Eucalypt Open Forests
NVIS 4.1 Major Vegetation Subgroups	Eucalyptus open forests with a shrubby understorey
Tenure of Australia's forests (2013) v2.0	Nature Conservation Reserve
Vegetation types - native	Eucalypt open forests
Vegetation types - present	Eucalyptus open forest

Environmental sampling for this location

Biodiversity
Occurrence Density	4838.0 frequency
Species Richness	1051.0 frequency
Climate
Precipitation - annual (Bio12)	788.0 mm
Precipitation - coldest quarter (Bio19)	292.0 mm
Precipitation - driest period (Bio14)	7.0 mm
Precipitation - driest quarter (Bio17)	106.0 mm
Precipitation - seasonality (Bio15)	38.0 mm
Precipitation - warmest quarter (Bio18)	112.0 mm
Precipitation - wettest period (Bio13)	24.0 mm
Precipitation - wettest quarter (Bio16)	292.0 mm
Radiation - annual mean (Bio20)	15.5 MJ/m2/day
Radiation - seasonality (Bio23)	45.0
Radiation - warmest quarter (Bio26)	23.8 MJ/m2/day
Temperature - annual mean (Bio01)	12.3 degrees C
Temperature - annual range (Bio07)	23.8 degrees C
Temperature - coldest period min (Bio06)	3.0 degrees C
Temperature - coldest quarter mean (Bio11)	7.4 degrees C
Temperature - diurnal range mean (Bio02)	11.3 degrees C
Temperature - driest quarter mean (Bio09)	17.6 degrees C
Temperature - isothermality (Bio03)	0.48 %
Temperature - seasonality (Bio04)	1.44
Temperature - warmest period max (Bio05)	26.8 degrees C
Temperature - warmest quarter (Bio10)	17.8 degrees C
Temperature - wettest quarter mean (Bio08)	7.4 degrees C
WorldClim 2.1: Precipitation - annual	982.0 mm
WorldClim 2.1: Precipitation - coldest quarter	354.0 mm
WorldClim 2.1: Precipitation - driest month	34.0 mm
WorldClim 2.1: Precipitation - driest quarter	129.0 mm
WorldClim 2.1: Precipitation - seasonality	37.51413 mm
WorldClim 2.1: Precipitation - warmest quarter	129.0 mm
WorldClim 2.1: Precipitation - wettest month	123.0 mm
WorldClim 2.1: Precipitation - wettest quarter	354.0 mm
WorldClim 2.1: Temperature - annual mean	10.816667 °C
WorldClim 2.1: Temperature - annual range	20.3 °C
WorldClim 2.1: Temperature - coldest month min	2.7 °C
WorldClim 2.1: Temperature - coldest quarter mean	6.2166667 °C
WorldClim 2.1: Temperature - diurnal range mean	9.333333 °C
WorldClim 2.1: Temperature - driest quarter mean	15.65 °C
WorldClim 2.1: Temperature - isothermality	45.977013 %
WorldClim 2.1: Temperature - seasonality	380.67722
WorldClim 2.1: Temperature - warmest month max	23.0 °C
WorldClim 2.1: Temperature - warmest quarter mean	15.65 °C
WorldClim 2.1: Temperature - wettest quarter mean	6.2166667 °C
WorldClim: Temperature - isothermality	49.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.68
Moisture Index - highest quarter mean (Bio32)	1.0
Elevation	767.0 m

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Rattus rattus (Linnaeus, 1758)	Rattus rattus
	Match type		exactMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/c1817333-9c62-4a05-af03-fe5fb9c9a0ce
	Order	Rodentia	Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/c1817333-9c62-4a05-af03-fe5fb9c9a0ce
	Genus	Rattus	Rattus
	Left		53578
	Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
	Scientific name authorship	(Linnaeus, 1758)	(Linnaeus, 1758)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name	Black Rat	Black Rat
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53578
	Kingdom	Animalia	Animalia
	Specific epithet	rattus
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus rattus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Event ID	Grampians2021_0022
	Year	2022	2022
	End day of year		291
	Month	10	10
	Date precision		DAY
	Start day of year		291
	Day	18	18
	Event date	2022-10-18T00:00:00\2022-10-18T00:00:00	2022-10-18
Identification	Identified by	[Dr Kevin C. Rowe - Museums Victoria]
Occurrence	Associated occurrences		22174c84-41b8-4115-8e98-03c97e836ad1
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Duplication status		D
	Field number	Grampians2021_0022
	Language	en
	Type		PhysicalObject
	Catalog number	Z77123
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2024-08-09T12:19:00	2024-08-09T12:19
	Collection code	DNA laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA laboratory:MaterialSample:Z77123
	Owner institution code	NMV
	Preparations	cell\|Frozen\|Cryopreservation medium\|Cell\|-196°C
	Duplicate status		ASSOCIATED
	Institution code	NMV
	Sex	Unknown
	Disposition	In collection
	Recorded by	Dr Kevin C. Rowe - Museums Victoria
	Life stage	Adult	{"concept": "Adult", "lineage": ["Adult"]}
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Decimal latitude	-37.3405	-37.3405
	Terrestrial	true	true
	Locality	Grampians National Park, Victoria Range Track, 2.4km by road E of intersection with Sawmill Track	Grampians National Park, Victoria Range Track, 2.4km by road E of intersection with Sawmill Track
	Minimum elevation in meters	415	415.0
	Decimal longitude	142.302	142.302
	State province	Victoria	Victoria
	Verbatim locality	Grampians National Park, Victoria Range Track, 2.4km by road E of intersection with Sawmill Track
	Maximum elevation in meters	416	416.0
	Biome		TERRESTRIAL
	Lga	Southern Grampians (S)
	Marine	false	false
	Country code		AU
	Georeference protocol	GARMIN GPSmap 62s
	Geodetic datum	GDA94	EPSG:4326
	Location ID	VR01
	Georeference sources	Collector

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