Occurrence record: DNA Laboratory:Z26035

Material Sample of Lissotriton vulgaris Linnaeus, 1758 | Common Newt

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z26035
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z26035
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Tissue\|Frozen\|Liver\|RNAlater\|-196°C
Collector	Department of Primary Industries Supplied as "Department of Primary Industries"
Sex	Unknown
Individual count	1
Life stage	adult
Associated Occurrence Status	Associated record
Associated occurrences	The occurrence is associated with a representative record. For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Herpetology:PreservedSpecimen:D75501
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Relationship of resource	same individual
Owner institution code	NMV
Associated records	ASSOCIATED
Disposition	In collection
Date identified	/12/2012

Event

Occurrence date	Year: 2012, Month: 10, Day: Supplied as year:2012 month:10
Date precision	MONTH

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Amphibia \| Urodela \| Salamandridae
Scientific name	Lissotriton vulgaris Supplied scientific name "Lissotriton vulgaris (Linnaeus, 1758)"
Identified to rank	species
Common name	Common Newt
Kingdom	Animalia
Phylum	Chordata
Class	Amphibia
Order	Caudata Supplied as "Urodela"
Family	Salamandridae
Genus	Lissotriton
Species	Lissotriton vulgaris
Name match metric	canonicalMatch
Scientific name authorship	Linnaeus, 1758 Supplied as (Linnaeus, 1758)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Higher geography	Australia \| Victoria
Country	Australia
State or Territory	Victoria
Locality	near Melbourne
Latitude	-37.82 Supplied as: "-37.82"
Longitude	144.97 Supplied as: "144.97"
Datum	EPSG:4326 Supplied datum: "WGS84"
Verbatim locality	near Melbourne
Coordinate precision	Unknown
Coordinate uncertainty (in metres)	25.0
Terrestrial	true
Biome	TERRESTRIAL
Marine	false
Country Code	AU

Additional properties

blocked	Available for loan
material sample type	Tissue
preparation materials	RNAlater
preparation type	Liver
prepared by	Karen K. Roberts
preservation date begin	2013-02-28T00:00:00
preservation temperature	-196°C
preservation type	RNAlater

User flagged issues

Data quality tests

Test name	Result
Show/Hide 99 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinate uncertainty meters invalid	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identified date invalid	Passed
Identified date unlikely	Passed
Identification date before occurrence date	Passed
Individual count conflicts with occurrence status	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date invalid	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 5 missing properties
Missing georeferenced by	Missing
Missing georeference protocol	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 20 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record is associated with the representative record. This mean another record has been detected to be similar to this record, and that the other record (the representative record) has the most detailed information for the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	40f6fcd1-bec0-4830-a078-e8a463740882
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97
Related records
Record UUID	d409b45c-d8f1-4833-9368-ac9b8db0320a
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97
Record UUID	9386339b-0695-452e-a7c6-bfc9d4ebc22a
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97
Record UUID	dd3ca527-0124-46e7-a30a-39d0cfa813db
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97
Record UUID	f7c5e6f1-0529-4855-b9ef-930ced99c552
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97
Record UUID	a2320930-fddb-4155-977d-599a2201937a
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97
Record UUID	9d8573a9-97d2-4a52-8a14-f6cc85e87848
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97
Record UUID	6bf8f86f-4af6-4c0d-9929-a26ad5627af2
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Lissotriton vulgaris (Linnaeus, 1758)
Coordinates	-37.82,144.97

Additional political boundaries information

Area Management
NRM Regions 2010	South Australian Arid Lands
NRM Regions 2017	South Australian Arid Lands
Area management
National Landcare Program Management Units 2018	South Australian Arid Lands
Biodiversity
IBRA 6 Regions	Gawler
IBRA 7 Regions	Gawler
IBRA 7 Subregions	Myall Plains
Hydrology
Drainage Divisions Level 1	South Western Plateau
Drainage Divisions Level 2	GAIRDNER
Marine
States including coastal waters	South Australia (including Coastal Waters)
Political
ASGS Australian States and Territories	South Australia
Australian States and Territories	South Australia
Local Government Areas 2011	Unincorporated SA
Local Government Areas 2012 deprecated	Unincorp. Lincoln
Local Government Areas PSMA 2018	PASTORAL UNINCORPORATED AREA
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	73
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	505
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF SA
PSMA ABS SA2 Statistical Areas (2016)	OUTBACK
PSMA ABS SA3 Statistical Areas (2016)	OUTBACK - NORTH AND EAST
PSMA ABS SA4 Statistical Areas (2016)	SOUTH AUSTRALIA - OUTBACK
PSMA Commonwealth Electoral Boundaries (2018)	GREY
PSMA Indigenous Areas (2016)	EYRE
PSMA Indigenous Locations (2016)	LAKE EYRE - LAKE TORRENS
PSMA Indigenous Regions (2016)	PORT AUGUSTA
PSMA Remoteness Areas (2016)	Very Remote Australia
PSMA State Electoral Boundaries (2018)	GILES
PSMA States (2016)	SOUTH AUSTRALIA
World Country Boundaries	Australia
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Other special rights, Non forest
Forests of Australia (2013) v2.0	Non Forest
Forests of Australia 2018B	Non forest
NVIS 4.1 Major Vegetation Groups	Acacia Open Woodlands
NVIS 4.1 Major Vegetation Subgroups	Acacia (+/- low) open woodlands and sparse shrublands with chenopods
Tenure of Australia's forests (2013) v2.0	Nature Conservation Reserve
Vegetation types - native	Acacia open woodlands
Vegetation types - present	Acacia open woodlands

Environmental sampling for this location

Climate
Precipitation - annual (Bio12)	282.0 mm
Precipitation - coldest quarter (Bio19)	103.0 mm
Precipitation - driest period (Bio14)	3.0 mm
Precipitation - driest quarter (Bio17)	37.0 mm
Precipitation - seasonality (Bio15)	39.0 mm
Precipitation - warmest quarter (Bio18)	42.0 mm
Precipitation - wettest period (Bio13)	9.0 mm
Precipitation - wettest quarter (Bio16)	104.0 mm
Radiation - annual mean (Bio20)	19.2 MJ/m2/day
Radiation - seasonality (Bio23)	36.0
Radiation - warmest quarter (Bio26)	26.8 MJ/m2/day
Temperature - annual mean (Bio01)	17.3 degrees C
Temperature - annual range (Bio07)	28.4 degrees C
Temperature - coldest period min (Bio06)	4.9 degrees C
Temperature - coldest quarter mean (Bio11)	11.2 degrees C
Temperature - diurnal range mean (Bio02)	14.5 degrees C
Temperature - driest quarter mean (Bio09)	22.2 degrees C
Temperature - isothermality (Bio03)	0.51 %
Temperature - seasonality (Bio04)	1.67
Temperature - warmest period max (Bio05)	33.3 degrees C
Temperature - warmest quarter (Bio10)	23.5 degrees C
Temperature - wettest quarter mean (Bio08)	11.4 degrees C
WorldClim 2.1: Temperature - annual mean	17.3625 °C
WorldClim: Temperature - isothermality	51.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.19
Moisture Index - highest quarter mean (Bio32)	0.43
Elevation	223.0 m

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Lissotriton vulgaris (Linnaeus, 1758)	Lissotriton vulgaris
	Match type		canonicalMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/c80785b8-9868-4a03-8f87-d791997bc370
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/7bef9cc8-12d2-4112-9f95-15abfe3c2a37
	Order	Urodela	Caudata
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/7bef9cc8-12d2-4112-9f95-15abfe3c2a37
	Genus	Lissotriton	Lissotriton
	Left		27650
	Higher classification	Animalia \| Chordata \| Vertebrata \| Amphibia \| Urodela \| Salamandridae
	Scientific name authorship	(Linnaeus, 1758)	Linnaeus, 1758
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/8b642763-a5f6-41a7-9d65-20b1f3e3576e
	Name type		SCIENTIFIC
	Vernacular name	Common Newt	Common Newt
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/112dc849-5eaa-4901-83cd-2a304a16a883
	Right		27650
	Kingdom	Animalia	Animalia
	Specific epithet	vulgaris
	Class id		https://biodiversity.org.au/afd/taxa/257dcc26-6efb-4e13-9a7b-5fc4de68b608
	Phylum	Chordata	Chordata
	Class	Amphibia	Amphibia
	Species		Lissotriton vulgaris
	Family	Salamandridae	Salamandridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Year	2012	2012
	Month	10	10
	Date precision		MONTH
Identification	Date identified	/12/2012
Occurrence	Associated occurrences		40f6fcd1-bec0-4830-a078-e8a463740882
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Individual count	1	1
	Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Herpetology:PreservedSpecimen:D75501
	Duplication status		D
	Language	en
	Type		PhysicalObject
	Catalog number	Z26035
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2020-06-01T11:58:00	2020-06-01T11:58
	Relationship of resource	same individual
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z26035
	Owner institution code	NMV
	Preparations	Tissue\|Frozen\|Liver\|RNAlater\|-196°C
	Duplicate status		ASSOCIATED
	Institution code	NMV
	Sex	Unknown
	Disposition	In collection
	Recorded by	Department of Primary Industries	[Department of Primary Industries]
	Life stage	adult	{"concept": "Adult", "lineage": ["Adult"]}
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Decimal latitude	-37.82	-37.82
	Terrestrial	true	true
	Higher geography	Australia \| Victoria
	Locality	near Melbourne	near Melbourne
	Decimal longitude	144.97	144.97
	State province	Victoria	Victoria
	Verbatim locality	near Melbourne
	Biome		TERRESTRIAL
	Coordinate uncertainty in meters	25	25.0
	Lga	Melbourne (C)
	Marine	false	false
	Country code		AU
	Geodetic datum	WGS84	EPSG:4326

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