Occurrence record: AustralianBiologicalTissueCollection:ABTC8848.3

Material Sample of Rattus norvegicus (Berkenhout, 1769) | Brown Rat

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	South Australian Museum Adelaide provider for OZCAM
Institution code	South Australian Museum Supplied institution code "SAMA"
Collection	South Australian Museum Australian Biological Tissue Collection Supplied collection code "AustralianBiologicalTissueCollection"
Catalog number	ABTC8848.3
Other catalog numbers	["ecatalogue.irn:538876"]
Record type	Material Sample Supplied basis "MaterialSample"
Record number	CATALOG18:1
Associated Occurrence Status	Representative record
Associated occurrences	This record has 2 inferred associated occurrences For more information see Inferred associated occurrence details
License	CC-BY
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Associated records	REPRESENTATIVE
Disposition	in collection

Event

Event ID	urn:emu.sam.sa.gov.au:Event:192436
Date precision	NOT_SUPPLIED

Taxonomy

Scientific name	Rattus norvegicus Supplied scientific name "Rattus norvegicus (Berkenhout, 1769)"
Identified to rank	species
Common name	Brown Rat
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus norvegicus
Name match metric	exactMatch
Scientific name authorship	(Berkenhout, 1769)
Name parse type	SCIENTIFIC

Geospatial

Locality	laboratory strain
Verbatim locality	laboratory strain
Terrestrial	false
Marine	false

Additional properties

blocked	no
material sample type	tissue
preparation type	Muscle
preservation temperature	-70 degrees Celsius
preservation type	Frozen
related resource catalog number	No voucher

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Location not supplied	Warning
Show/Hide 61 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Different owner institution	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 6 missing properties
Missing collection date	Missing
Missing georeferenced by	Missing
Missing georeference protocol	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 55 tests that have not been run
Supplied coordinates centre of state	Unchecked (lack of data)
Coordinate precision and uncertainty transposed	Unchecked (lack of data)
Uncertainty not specified	Unchecked (lack of data)
Coordinates dont match supplied state	Unchecked (lack of data)
Supplied country not recognised	Unchecked (lack of data)
Coordinates centre of country	Unchecked (lack of data)
Missing geodetic datum	Unchecked (lack of data)
Georeferenced after occurrence date	Unchecked (lack of data)
Identification date before occurrence date	Unchecked (lack of data)
First of the month	Unchecked (lack of data)
First of the year	Unchecked (lack of data)
First of the century	Unchecked (lack of data)
Supplied coordinates are zero	Unchecked (lack of data)
Coordinates are out of range for species	Unchecked (lack of data)
Coordinate invalid	Unchecked (lack of data)
Coordinate rounded	Unchecked (lack of data)
Unrecognized geodetic datum	Unchecked (lack of data)
Geodetic datum assumed WGS84	Unchecked (lack of data)
Coordinates converted to WGS84	Unchecked (lack of data)
Decimal latitude/longitude conversion failed	Unchecked (lack of data)
Coordinate reprojection suspicious	Unchecked (lack of data)
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
Coordinates dont match supplied country	Unchecked (lack of data)
Country mismatch	Unchecked (lack of data)
Country invalid	Unchecked (lack of data)
Country inferred from coordinates	Unchecked (lack of data)
Presumed swapped coordinate	Unchecked (lack of data)
Longitude is negated	Unchecked (lack of data)
Latitude is negated	Unchecked (lack of data)
Recorded date mismatch	Unchecked (lack of data)
Recorded date invalid	Unchecked (lack of data)
Recorded date unlikely	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Individual count invalid	Unchecked (lack of data)
Individual count conflicts with occurrence status	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record has been identified as the representative occurrence in a group of associated occurrences. This mean other records have been detected that seem to relate to this record and this particular record has the most detailed information on the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	9dc6f09d-89c0-41b9-818a-e9a3327a92ae
Data Resource	South Australian Museum Adelaide provider for OZCAM
Raw Scientific Name	Rattus norvegicus (Berkenhout, 1769)
Related records
Record UUID	d5eade57-0a2f-447c-889f-d3e36d098408
Data Resource	South Australian Museum Adelaide provider for OZCAM
Raw Scientific Name	Rattus norvegicus (Berkenhout, 1769)
Record UUID	d18b1d1f-2702-4b77-9052-7db15e3595ca
Data Resource	South Australian Museum Adelaide provider for OZCAM
Raw Scientific Name	Rattus norvegicus (Berkenhout, 1769)

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Rattus norvegicus (Berkenhout, 1769)	Rattus norvegicus
	Match type		exactMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/15e09f34-5033-424e-a37c-d6bb55f30b26
	Order	Rodentia	Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/15e09f34-5033-424e-a37c-d6bb55f30b26
	Genus	Rattus	Rattus
	Left		53548
	Scientific name authorship		(Berkenhout, 1769)
	Taxon rank	species	species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name		Brown Rat
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53548
	Kingdom		Animalia
	Specific epithet	norvegicus
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus norvegicus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Event ID	urn:emu.sam.sa.gov.au:Event:192436
Event	Date precision		NOT_SUPPLIED
Occurrence	Associated occurrences		d5eade57-0a2f-447c-889f-d3e36d098408\|d18b1d1f-2702-4b77-9052-7db15e3595ca
	Duplication status		R
	Type		PhysicalObject
	Catalog number	ABTC8848.3
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2021-10-19	2021-10-19
	Record number	CATALOG18:1
	Collection code	AustralianBiologicalTissueCollection
	Duplicate status		REPRESENTATIVE
	Institution code	SAMA
	Disposition	in collection
	Other catalog numbers	[ecatalogue.irn:538876]
Attribution	Data resource		South Australian Museum Adelaide provider for OZCAM
	Collection		South Australian Museum Australian Biological Tissue Collection
	License		CC-BY
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr346	dr346
	Institution ID		in22
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		South Australian Museum
	Data hub uid	[dh1]
	Collection ID		co166
Location	Terrestrial	false	false
	Locality	laboratory strain	laboratory strain
	Verbatim locality	laboratory strain
	Marine	false	false

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