Occurrence record: DNA Laboratory:Z457-1

Material Sample of Rattus lutreolus (J.E. Gray, 1841) | Swamp Rat recorded on 2003-07-02

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z457-1
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z457-1
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Heart\|-196°C
Associated Occurrence Status	Associated record
Associated occurrences	The occurrence is associated with a representative record. For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Owner institution code	NMV
Sampling protocol	[Mammal traps]
Associated records	ASSOCIATED
Disposition	In collection

Event

Occurrence date	2003-07-02 Supplied date "2003-07-02T00:00:00\2003-07-02T00:00:00"
Sampling protocol	Mammal traps
Date precision	DAY

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
Scientific name	Rattus lutreolus Supplied scientific name "Rattus lutreolus (Gray, 1841)"
Identified to rank	species
Common name	Swamp Rat Supplied common name "Australian Swamp Rat"
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus lutreolus
Name match metric	canonicalMatch
Scientific name authorship	(J.E. Gray, 1841) Supplied as (Gray, 1841)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Higher geography	Australia \| Victoria
Country	Australia
State or Territory	Victoria
Locality	2 Kms North of Heathmere on Surrey River (NE of Portland)
Latitude	-38.2019 Supplied as: "-38.2019"
Longitude	141.62 Supplied as: "141.62"
Datum	EPSG:4326 Supplied datum: "WGS84"
Verbatim locality	2 Kms North of Heathmere on Surrey River (NE of Portland)
Coordinate precision	Unknown
Georeference sources	Google Earth
Georeference protocol	Estimated
Georeferenced by	Karen K. Roberts
Terrestrial	true
Georeferenced date	2013-05-29T00:00 Supplied as 2013-05-29T00:00:00
Biome	TERRESTRIAL
Marine	false
Country Code	AU

Additional properties

material sample type	Tissue
preparation type	Heart
preservation temperature	-196°C

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Georeferenced after occurrence date	Warning
Recorded date invalid	Warning
Show/Hide 98 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced date invalid	Passed
Georeferenced date unlikely	Passed
Identification date before occurrence date	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeferenced by	Passed
Missing georeference protocol	Passed
Missing georeference sources	Passed
Missing georeference date	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 1 missing properties
Missing georeference verification status	Missing
Show/Hide 22 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Individual count invalid	Unchecked (lack of data)
Individual count conflicts with occurrence status	Unchecked (lack of data)

Inferred associated occurrence details

This record is associated with the representative record. This mean another record has been detected to be similar to this record, and that the other record (the representative record) has the most detailed information for the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	6d522c64-0908-4b0d-a8e9-4d367e0cf904
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.2019,141.62
Related records
Record UUID	98617f88-7bca-4880-9e97-5cc2b6c0218c
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.2019,141.62
Record UUID	81708c06-0bfb-4c44-88d7-c08cb5e1e156
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.2019,141.62
Record UUID	dd24c8ca-ebb6-4100-a6e8-209728d6f72c
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.2019,141.62

Additional political boundaries information

Area Management
NRM Regions 2010	South Australian Murray Darling Basin
NRM Regions 2017	South Australian Murray Darling Basin
Area management
National Landcare Program Management Units 2018	South Australian Murray Darling Basin
Biodiversity
IBRA 6 Regions	Murray Darling Depression
IBRA 7 Regions	Murray Darling Depression
IBRA 7 Subregions	Murray Mallee
Hydrology
Drainage Divisions Level 1	Murray-Darling Basin
Drainage Divisions Level 2	DARLING RIVER
Marine
States including coastal waters	South Australia (including Coastal Waters)
Political
ASGS Australian States and Territories	South Australia
Australian States and Territories	South Australia
Local Government Areas 2011	Karoonda East Murray (DC)
Local Government Areas 2012 deprecated	Karoonda East Murray
Local Government Areas PSMA 2018	THE DC OF KAROONDA EAST MURRAY
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	103
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	384
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF SA
PSMA ABS SA2 Statistical Areas (2016)	KAROONDA - LAMEROO
PSMA ABS SA3 Statistical Areas (2016)	MURRAY AND MALLEE
PSMA ABS SA4 Statistical Areas (2016)	SOUTH AUSTRALIA - SOUTH EAST
PSMA Commonwealth Electoral Boundaries (2018)	BARKER
PSMA Indigenous Areas (2016)	MURRAY MALLEE
PSMA Indigenous Locations (2016)	MURRAY MALLEE
PSMA Indigenous Regions (2016)	ADELAIDE
PSMA Remoteness Areas (2016)	Outer Regional Australia
PSMA State Electoral Boundaries (2018)	LEGISLATIVE COUNCIL
PSMA States (2016)	SOUTH AUSTRALIA
World Country Boundaries	Australia
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Non-Indigenous, Non forest
Forests of Australia (2013) v2.0	Non Forest
Forests of Australia 2018B	Eucalypt Mallee Woodland
NVIS 4.1 Major Vegetation Groups	Mallee Open Woodlands and Sparse Mallee Shrublands
NVIS 4.1 Major Vegetation Subgroups	Open mallee woodlands and sparse mallee shrublands with a dense shrubby understorey
Tenure of Australia's forests (2013) v2.0	Private Freehold
Vegetation types - native	Mallee woodlands and shrublands
Vegetation types - present	Mallee woodlands and shrublands

Environmental sampling for this location

Climate
Precipitation - annual (Bio12)	304.0 mm
Precipitation - coldest quarter (Bio19)	101.0 mm
Precipitation - driest period (Bio14)	3.0 mm
Precipitation - driest quarter (Bio17)	45.0 mm
Precipitation - seasonality (Bio15)	32.0 mm
Precipitation - warmest quarter (Bio18)	48.0 mm
Precipitation - wettest period (Bio13)	8.0 mm
Precipitation - wettest quarter (Bio16)	103.0 mm
Radiation - annual mean (Bio20)	17.9 MJ/m2/day
Radiation - seasonality (Bio23)	40.0
Radiation - warmest quarter (Bio26)	26.0 MJ/m2/day
Temperature - annual mean (Bio01)	16.2 degrees C
Temperature - annual range (Bio07)	27.4 degrees C
Temperature - coldest period min (Bio06)	4.3 degrees C
Temperature - coldest quarter mean (Bio11)	10.7 degrees C
Temperature - diurnal range mean (Bio02)	14.3 degrees C
Temperature - driest quarter mean (Bio09)	21.5 degrees C
Temperature - isothermality (Bio03)	0.52 %
Temperature - seasonality (Bio04)	1.54
Temperature - warmest period max (Bio05)	31.7 degrees C
Temperature - warmest quarter (Bio10)	22.0 degrees C
Temperature - wettest quarter mean (Bio08)	12.8 degrees C
WorldClim 2.1: Temperature - annual mean	16.408333 °C
WorldClim: Temperature - isothermality	52.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.26
Moisture Index - highest quarter mean (Bio32)	0.54
Elevation	66.0 m

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Rattus lutreolus (Gray, 1841)	Rattus lutreolus
	Match type		canonicalMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/2910ea05-7539-434c-bcc8-ca48d038b82b
	Order	Rodentia	Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/2910ea05-7539-434c-bcc8-ca48d038b82b
	Genus	Rattus	Rattus
	Left		53550
	Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
	Scientific name authorship	(Gray, 1841)	(J.E. Gray, 1841)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name	Australian Swamp Rat	Swamp Rat
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53556
	Kingdom	Animalia	Animalia
	Specific epithet	lutreolus
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus lutreolus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Year	2003	2003
	Month	7	7
	Date precision		DAY
	Day	2	2
	Event date	2003-07-02T00:00:00\2003-07-02T00:00:00	2003-07-02
Occurrence	Associated occurrences		6d522c64-0908-4b0d-a8e9-4d367e0cf904
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Duplication status		D
	Language	en
	Type		PhysicalObject
	Catalog number	Z457-1
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2020-09-28T15:53:00	2020-09-28T15:53
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z457-1
	Owner institution code	NMV
	Sampling protocol	[Mammal traps]
	Preparations	Heart\|-196°C
	Duplicate status		ASSOCIATED
	Institution code	NMV
	Disposition	In collection
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Decimal latitude	-38.2019	-38.2019
	Terrestrial	true	true
	Georeferenced date	2013-05-29T00:00:00	2013-05-29T00:00
	Higher geography	Australia \| Victoria
	Georeferenced by	Karen K. Roberts
	Locality	2 Kms North of Heathmere on Surrey River (NE of Portland)	2 Kms North of Heathmere on Surrey River (NE of Portland)
	Decimal longitude	141.62	141.62
	State province	Victoria	Victoria
	Verbatim locality	2 Kms North of Heathmere on Surrey River (NE of Portland)
	Biome		TERRESTRIAL
	Lga	Glenelg (S)
	Marine	false	false
	Country code		AU
	Georeference protocol	Estimated
	Geodetic datum	WGS84	EPSG:4326
	Georeference sources	Google Earth

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