Occurrence record: GeneticSamples:G47240

Material Sample of Rattus rattus (Linnaeus, 1758) | Black Rat recorded on 2003-10-24

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Australian National Wildlife Collection provider for OZCAM
Institution code	Commonwealth Scientific and Industrial Research Organisation Supplied institution code "ANWC"
Collection	Australian National Wildlife Collection Supplied collection code "GeneticSamples"
Catalog number	G47240
Record type	Material Sample Supplied basis "MaterialSample"
Sex	male
Associated Occurrence Status	Associated record
Associated occurrences	The occurrence is associated with a representative record. For more information see Inferred associated occurrence details
Associated occurrences	ANWC:Mammals:M36585
License	CC-BY
Rights holder	CSIRO
Field Number	PNG2
Establishment means	wild location
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Relationship of resource	sample of
Bibliographic citation	G47240
Collection	urn:lsid:biocol.org:col:34932
Associated records	ASSOCIATED
Dataset / Survey name	[2003-2010 Papua New Guinea collections]
Disposition	in collection
Dataset	[urn:anwc.csiro.au:collections:62]

Event

Dataset / Survey name	2003-2010 Papua New Guinea collections
Field Number	PNG2
Occurrence date	2003-10-24
Verbatim event date	24-Oct-03
Date precision	DAY

Taxonomy

Scientific name	Rattus rattus
Identified to rank	species
Common name	Black Rat
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus rattus
Name match metric	exactMatch
Scientific name authorship	(Linnaeus, 1758)
Name parse type	SCIENTIFIC

Geospatial

Country	Papua New Guinea
State or Territory	Morobe
Locality	Atzunai Village, Upper Markham Valley
Latitude	-6.27 Supplied as: "-6.27"
Longitude	146.16 Supplied as: "146.16"
Datum	EPSG:4326
Verbatim locality	Atzunai Village, Upper Markham Valley
Water body	not applicable
Island	New Guinea
Island group	not applicable
Coordinate precision	0.01
Coordinate uncertainty (in metres)	1000.0
County	not applicable
Terrestrial	true
Biome	TERRESTRIAL
Continent	Oceania
Marine	false
Country Code	PG
Verbatim SRS	WGS84

Additional properties

loan conditions	approval from ANWC Director
material sample type	tissue
permit status	permit not available
permit status qualifier	pre-Nagoya (12/10/2014)
permit type	not applicable
preparation date	not recorded
preparation materials	none
preparation type	tissue; type not recorded
prepared by	not recorded
preservation temperature	-80 degrees Celsius
preservation type	tube ethanol
verbatim uncertainty	confident in available location data

User flagged issues

Data quality tests

Test name	Result
CONTINENT_COORDINATE_MISMATCH	Warning
Geodetic datum assumed WGS84	Warning
Show/Hide 92 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinate precision invalid	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinate uncertainty meters invalid	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date invalid	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 7 missing properties
Missing geodetic datum	Missing
Missing georeferenced by	Missing
Missing georeference protocol	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Missing taxon rank	Missing
Show/Hide 23 tests that have not been run
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Individual count invalid	Unchecked (lack of data)
Individual count conflicts with occurrence status	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record is associated with the representative record. This mean another record has been detected to be similar to this record, and that the other record (the representative record) has the most detailed information for the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	729558d4-1d04-4749-b5c0-01ff48ac14e9
Data Resource	Australian National Wildlife Collection provider for OZCAM
Raw Scientific Name	Rattus rattus
Coordinates	-6.27,146.16
Related records
Record UUID	783a7edf-a7dd-45dd-8428-183c5523abe6
Data Resource	Australian National Wildlife Collection provider for OZCAM
Raw Scientific Name	Rattus rattus
Coordinates	-6.27,146.16

Additional political boundaries information

Political
World Country Boundaries	Papua New Guinea

Environmental sampling for this location

Climate
WorldClim 2.1: Temperature - annual mean	25.3125 °C
WorldClim: Temperature - isothermality	84.0 %

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Rattus rattus	Rattus rattus
	Match type		exactMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/c1817333-9c62-4a05-af03-fe5fb9c9a0ce
	Order		Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/c1817333-9c62-4a05-af03-fe5fb9c9a0ce
	Genus	Rattus	Rattus
	Left		53578
	Scientific name authorship		(Linnaeus, 1758)
	Taxon rank		species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name	Black Rat	Black Rat
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53578
	Kingdom	Animalia	Animalia
	Specific epithet	rattus
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus rattus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Verbatim event date	24-Oct-03
	Year		2003
	Dataset / Survey name	[2003-2010 Papua New Guinea collections]
	Month		10
	Date precision		DAY
	Day		24
	Event date	2003-10-24	2003-10-24
Occurrence	Associated occurrences	<a href="https://biocache.ala.org.au/occurrences/search?q=institution_code:%22ANWC%22%20AND%20collection_code:%22Mammals%22%20AND%20catalogue_number:%22M36585%22"> ANWC:Mammals:M36585</a>	729558d4-1d04-4749-b5c0-01ff48ac14e9
	Rights holder		CSIRO
	Duplication status		D
	Field number	PNG2
	Establishment means	wild location
	Type		PhysicalObject
	Catalog number	G47240
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	6/08/2021 2:39:47 PM
	Relationship of resource	sample of
	Collection code	GeneticSamples
	Bibliographic citation	G47240
	Collection ID	urn:lsid:biocol.org:col:34932
	Duplicate status		ASSOCIATED
	Institution code	ANWC
	Sex	male	MALE
	Dataset / Survey name	[2003-2010 Papua New Guinea collections]
	Disposition	in collection
	Dataset ID	[urn:anwc.csiro.au:collections:62]
Attribution	Data resource		Australian National Wildlife Collection provider for OZCAM
	Collection		Australian National Wildlife Collection
	License		CC-BY
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr341	dr341
	Institution ID		in6
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Commonwealth Scientific and Industrial Research Organisation
	Data hub uid	[dh1]
	Collection ID		co16
Location	Country	Papua New Guinea	Papua New Guinea
	County	not applicable
	Decimal latitude	-6.27	-6.27
	Terrestrial	true	true
	Island	New Guinea
	Locality	Atzunai Village, Upper Markham Valley	Atzunai Village, Upper Markham Valley
	Decimal longitude	146.16	146.16
	State province	Morobe	Morobe
	Verbatim locality	Atzunai Village, Upper Markham Valley
	Biome		TERRESTRIAL
	Continent	Oceania
	Coordinate uncertainty in meters	1000	1000.0
	Island group	not applicable
	Marine	false	false
	Country code		PG
	Verbatim SRS	WGS84
	Geodetic datum		EPSG:4326
	Water body	not applicable	not applicable
	Coordinate precision	0.01	0.01

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