Occurrence record: DNA Laboratory:Z25121

Material Sample of Pseudomys shortridgei (Thomas, 1907) | Heath Rat recorded on 2012-11-27

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z25121
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z25121
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Tissue\|Frozen\|Reproductive Organs\|RNALater\|-196°C
Identified by	Kevin C. Rowe - Museum Victoria
Collector	Dr Kevin C. Rowe - Museums Victoria \| Ben Holmes - Parks Victoria
Sex	Male
Individual count	1
Associated Occurrence Status	Associated record
Associated occurrences	The occurrence is associated with a representative record. For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Mammalogy:PreservedSpecimen:C37144
Field Number	GRB 474
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Relationship of resource	same individual
Owner institution code	NMV
Sampling protocol	[Mammal traps]
Associated records	ASSOCIATED
Country conservation	Endangered
Dataset / Survey name	[Grampians National Park BioScan 2012 (Grampians BioScan)]
Disposition	In collection
State conservation	Endangered
Date identified	2012-11-29 Supplied as 29/11/2012

Event

Dataset / Survey name	Grampians National Park BioScan 2012 (Grampians BioScan)
Event ID	GRB 474
Field Number	GRB 474
Occurrence date	2012-11-27 Supplied date "2012-11-27T00:00:00\2012-11-29T00:00:00"
Sampling protocol	Mammal traps
End day of year	332
Date precision	DAY
Start day of year	332

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Supramyomorpha \| Myomorphi \| Muroidea \| Muridae \| Murinae
Scientific name	Pseudomys shortridgei
Identified to rank	species
Common name	Heath Rat Supplied common name "Australian Heath Mouse"
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Pseudomys
Species	Pseudomys shortridgei
Name match metric	exactMatch
Scientific name authorship	(Thomas, 1907)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Country	Australia
State or Territory	Victoria
Locality	Grampians National Park, Glenelg River Road between Boundary Road and Greens Creek Road
Latitude	-37.3312 Supplied as: "-37.3312"
Longitude	142.36 Supplied as: "142.36"
Datum	EPSG:4326 Supplied datum: "WGS84"
Verbatim locality	Grampians National Park, Glenelg River Road between Boundary Road and Greens Creek Road
Min elevation	1147
Coordinate precision	Unknown
Coordinate uncertainty (in metres)	100.0
Georeference sources	GPS
Georeference protocol	gps
Terrestrial	true
Georeferenced date	2012-11-27T00:00 Supplied as 2012-11-27T00:00:00
Biome	TERRESTRIAL
Marine	false
Country Code	AU
Location ID	GRBS 2012 96

Additional properties

material sample type	Tissue
preparation materials	RNALater
preparation type	Reproductive Organs
prepared by	Kevin C. Rowe - Museum Victoria
preservation date begin	2012-11-29T00:00:00
preservation temperature	-196°C
preservation type	RNALater

User flagged issues

Data quality tests

Test name	Result
Recorded date invalid	Warning
Show/Hide 108 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinate uncertainty meters invalid	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
Min and max altitude reversed	Passed
Altitude value non-numeric	Passed
Altitude value supplied in feet	Passed
Elevation unlikely	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced date invalid	Passed
Georeferenced date unlikely	Passed
Georeferenced after occurrence date	Passed
Identified date invalid	Passed
Identified date unlikely	Passed
Identification date before occurrence date	Passed
Individual count conflicts with occurrence status	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeferenced by	Passed
Missing georeference protocol	Passed
Missing georeference sources	Passed
Missing georeference date	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 1 missing properties
Missing georeference verification status	Missing
Show/Hide 14 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record is associated with the representative record. This mean another record has been detected to be similar to this record, and that the other record (the representative record) has the most detailed information for the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	0b2653e7-daaa-4abc-9989-89140eb5782c
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Pseudomys shortridgei
Coordinates	-37.3312,142.36
Related records
Record UUID	cf5b9419-5a20-4d4f-9627-1242c9077cb9
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Pseudomys shortridgei
Coordinates	-37.3312,142.36
Record UUID	d88d24cf-5c83-4bf7-a774-9f9968e59e30
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Pseudomys shortridgei
Coordinates	-37.3312,142.36
Record UUID	77915248-3943-48f5-96b3-6e760fcbf026
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Pseudomys shortridgei
Coordinates	-37.3312,142.36
Record UUID	78daf72e-3a58-43d5-8ad4-094bb7010201
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Pseudomys shortridgei
Coordinates	-37.3312,142.36
Record UUID	1ae9d165-80f3-407b-bf7a-0e2075fe9113
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Pseudomys shortridgei
Coordinates	-37.3312,142.36

Additional political boundaries information

Area Management
CAPAD 2016 Terrestrial	Grampians National Park
CAPAD 2020 Terrestrial	Grampians
CAPAD 2022 - Terrestrial (Collaborative Australian Protected Areas Database)	Grampians
GER Central Victorial Biolinks	GER Central Victorial Biolinks
GER National Corridor	GER National Corridor
Great Eastern Ranges Initiative	GER Great Eastern Ranges Initiative
IBRA (Interim Biogeographic Regionalisation for Australia (IBRA) Version 7 (Regions)	Darwin Coastal
IBRA (Interim Biogeographic Regionalisation for Australia (IBRA) Version 7 (Subregions), contextual (polygon)	Darwin Coastal
NRM Regions 2010	Northern Territory
NRM Regions 2017	Northern Territory
Area management
National Landcare Program Management Units 2018	Northern Territory
Biodiversity
IBRA 6 Regions	Darwin Coastal
IBRA 7 Regions	Darwin Coastal
IBRA 7 Subregions	Darwin Coastal
Hydrology
Drainage Divisions Level 1	Tanami-Timor Sea Coast
Drainage Divisions Level 2	FINNISS RIVER
Marine
States including coastal waters	Northern Territory (including Coastal Waters)
Political
ASGS Australian States and Territories	Northern Territory
Australian States and Territories	Northern Territory
Local Government Areas 2011	Palmerston (C)
Local Government Areas 2012 deprecated	Driver
Local Government Areas PSMA 2018	PALMERSTON MUNICIPALITY
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	255
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	3809
PSMA ABS Greater Capital City Statistical Areas (2016)	GREATER DARWIN
PSMA ABS SA2 Statistical Areas (2016)	DRIVER
PSMA ABS SA3 Statistical Areas (2016)	PALMERSTON
PSMA ABS SA4 Statistical Areas (2016)	DARWIN
PSMA Commonwealth Electoral Boundaries (2018)	SOLOMON
PSMA Indigenous Areas (2016)	PALMERSTON
PSMA Indigenous Locations (2016)	DRIVER
PSMA Indigenous Regions (2016)	DARWIN
PSMA Remoteness Areas (2016)	Outer Regional Australia
PSMA State Electoral Boundaries (2018)	DRYSDALE
PSMA States (2016)	NORTHERN TERRITORY
World Country Boundaries	Australia
Social
Local Government Areas 2023	Palmerston
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Non-Indigenous, Non forest
Forests of Australia (2013) v2.0	Non Forest
Forests of Australia 2018B	Non forest
NVIS 4.1 Major Vegetation Groups	Cleared, non-native vegetation, buildings
NVIS 4.1 Major Vegetation Subgroups	Cleared, non-native vegetation, buildings
Tenure of Australia's forests (2013) v2.0	Private Freehold
Vegetation types - native	Tropical eucalypt woodlands/grasslands
Vegetation types - present	cleared, non-native vegetation, buildings

Environmental sampling for this location

Biodiversity
Occurrence Density	79808.0 frequency
Species Richness	2403.0 frequency
Climate
Precipitation - annual (Bio12)	1735.0 mm
Precipitation - coldest quarter (Bio19)	7.0 mm
Precipitation - driest period (Bio14)	0.0 mm
Precipitation - driest quarter (Bio17)	7.0 mm
Precipitation - seasonality (Bio15)	110.0 mm
Precipitation - warmest quarter (Bio18)	460.0 mm
Precipitation - wettest period (Bio13)	111.0 mm
Precipitation - wettest quarter (Bio16)	1162.0 mm
Radiation - annual mean (Bio20)	21.1 MJ/m2/day
Radiation - seasonality (Bio23)	8.0
Radiation - warmest quarter (Bio26)	22.8 MJ/m2/day
Temperature - annual mean (Bio01)	27.5 degrees C
Temperature - annual range (Bio07)	16.3 degrees C
Temperature - coldest period min (Bio06)	17.9 degrees C
Temperature - coldest quarter mean (Bio11)	24.9 degrees C
Temperature - diurnal range mean (Bio02)	9.8 degrees C
Temperature - driest quarter mean (Bio09)	25.0 degrees C
Temperature - isothermality (Bio03)	0.6 %
Temperature - seasonality (Bio04)	0.56
Temperature - warmest period max (Bio05)	34.2 degrees C
Temperature - warmest quarter (Bio10)	29.2 degrees C
Temperature - wettest quarter mean (Bio08)	28.2 degrees C
WorldClim 2.1: Precipitation - annual	1741.0 mm
WorldClim 2.1: Precipitation - coldest quarter	9.0 mm
WorldClim 2.1: Precipitation - driest month	1.0 mm
WorldClim 2.1: Precipitation - driest quarter	9.0 mm
WorldClim 2.1: Precipitation - seasonality	109.07499 mm
WorldClim 2.1: Precipitation - warmest quarter	505.0 mm
WorldClim 2.1: Precipitation - wettest month	451.0 mm
WorldClim 2.1: Precipitation - wettest quarter	1102.0 mm
WorldClim 2.1: Temperature - annual mean	27.325 °C
WorldClim 2.1: Temperature - annual range	16.500002 °C
WorldClim 2.1: Temperature - coldest month min	17.4 °C
WorldClim 2.1: Temperature - coldest quarter mean	24.75 °C
WorldClim 2.1: Temperature - diurnal range mean	9.966667 °C
WorldClim 2.1: Temperature - driest quarter mean	24.75 °C
WorldClim 2.1: Temperature - isothermality	60.404034 %
WorldClim 2.1: Temperature - seasonality	171.47092
WorldClim 2.1: Temperature - warmest month max	33.9 °C
WorldClim 2.1: Temperature - warmest quarter mean	29.016666 °C
WorldClim 2.1: Temperature - wettest quarter mean	28.066666 °C
WorldClim: Temperature - isothermality	61.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.52
Moisture Index - highest quarter mean (Bio32)	1.0
Elevation	24.0 m

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Pseudomys shortridgei	Pseudomys shortridgei
	Match type		exactMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/8c465f1e-1ff1-4d58-9c72-e9e79621525f
	Order	Rodentia	Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/8c465f1e-1ff1-4d58-9c72-e9e79621525f
	Genus	Pseudomys	Pseudomys
	Left		53482
	Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Supramyomorpha \| Myomorphi \| Muroidea \| Muridae \| Murinae
	Scientific name authorship		(Thomas, 1907)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/bb7b2387-2a0b-400d-a2da-bcaf1ffec957
	Name type		SCIENTIFIC
	Vernacular name	Australian Heath Mouse	Heath Rat
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53482
	Kingdom	Animalia	Animalia
	Specific epithet	shortridgei
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Pseudomys shortridgei
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Event ID	GRB 474
	Year	2012	2012
	End day of year		332
	Dataset / Survey name	[Grampians National Park BioScan 2012 (Grampians BioScan)]
	Month	11	11
	Date precision		DAY
	Start day of year		332
	Day	27	27
	Event date	2012-11-27T00:00:00\2012-11-29T00:00:00	2012-11-27
Identification	Date identified	29/11/2012	2012-11-29
Identification	Identified by	[Kevin C. Rowe - Museum Victoria]
Occurrence	Associated occurrences		0b2653e7-daaa-4abc-9989-89140eb5782c
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Individual count	1	1
	Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Mammalogy:PreservedSpecimen:C37144
	Duplication status		D
	Field number	GRB 474
	Language	en
	Type		PhysicalObject
	Catalog number	Z25121
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2024-09-04T15:15:00	2024-09-04T15:15
	Relationship of resource	same individual
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z25121
	Owner institution code	NMV
	Sampling protocol	[Mammal traps]
	Preparations	Tissue\|Frozen\|Reproductive Organs\|RNALater\|-196°C
	Duplicate status		ASSOCIATED
	Institution code	NMV
	Country conservation		Endangered
	Sex	Male	MALE
	Dataset / Survey name	[Grampians National Park BioScan 2012 (Grampians BioScan)]
	Disposition	In collection
	Recorded by	Dr Kevin C. Rowe - Museums Victoria \| Ben Holmes - Parks Victoria
	State conservation		Endangered
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Decimal latitude	-37.3312	-37.3312
	Terrestrial	true	true
	Georeferenced date	2012-11-27T00:00:00	2012-11-27T00:00
	Locality	Grampians National Park, Glenelg River Road between Boundary Road and Greens Creek Road	Grampians National Park, Glenelg River Road between Boundary Road and Greens Creek Road
	Minimum elevation in meters	1147	1147.0
	Decimal longitude	142.36	142.36
	State province	Victoria	Victoria
	Verbatim locality	Grampians National Park, Glenelg River Road between Boundary Road and Greens Creek Road
	Biome		TERRESTRIAL
	Coordinate uncertainty in meters	100	100.0
	Lga	Southern Grampians (S)
	Marine	false	false
	Country code		AU
	Georeference protocol	gps
	Geodetic datum	WGS84	EPSG:4326
	Location ID	GRBS 2012 96
	Georeference sources	GPS

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