Occurrence record: AustralianBiologicalTissueCollection:ABTC123192.1

Material Sample of Rattus rattus (Linnaeus, 1758) | Black Rat recorded on 1962-06-06

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	South Australian Museum Adelaide provider for OZCAM
Institution code	South Australian Museum Supplied institution code "SAMA"
Collection	South Australian Museum Australian Biological Tissue Collection Supplied collection code "AustralianBiologicalTissueCollection"
Catalog number	ABTC123192.1
Other catalog numbers	["ecatalogue.irn:540372"]
Record type	Material Sample Supplied basis "MaterialSample"
Record number	2237
Sex	Female
Individual count	0
Associated Occurrence Status	Representative record
Associated occurrences	This record has 1 inferred associated occurrences For more information see Inferred associated occurrence details
License	CC-BY
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Relationship of resource	same individual
Associated records	REPRESENTATIVE
Disposition	Consumed
Dataset	[F-ALC]

Event

Event ID	urn:emu.sam.sa.gov.au:Event:192801
Occurrence date	1962-06-06 Supplied date "6/06/1962"
End day of year	157
Date precision	DAY
Start day of year	157

Taxonomy

Scientific name	Rattus rattus Supplied scientific name "Rattus rattus flavipectus (Milne-Edwards, 1872)"
Identified to rank	species
Common name	Black Rat
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus rattus
Name match metric	higherMatch
Infraspecific epithet	flavipectus
Scientific name authorship	(Linnaeus, 1758)
Name parse type	SCIENTIFIC

Geospatial

Country	Libya
State or Territory	Cyrenaica
Locality	Apollonia, 27 Km E Apollonia, yrenaica
Latitude	32.8967 Supplied as: "32.8967"
Longitude	21.9631 Supplied as: "21.9631"
Datum	EPSG:4326
Coordinate precision	0.0001
Terrestrial	true
Verbatim latitude	32 53 48 N
Biome	TERRESTRIAL
Marine	false
Country Code	LY
Verbatim longitude	021 57 47 E

Additional properties

blocked	no
material sample type	tissue
preparation type	Hair
preservation temperature	Room temperature
preservation type	Ethanol
related resource catalog number	USNM:USNM325658
source file	SAM-Tissues-DWC-CSV-Export-2412181800.csv

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Geodetic datum assumed WGS84	Warning
Individual count conflicts with occurrence status	Warning
Taxon match higher rank	Warning
Show/Hide 93 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinate precision invalid	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date invalid	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 6 missing properties
Missing geodetic datum	Missing
Missing georeferenced by	Missing
Missing georeference protocol	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 21 tests that have not been run
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record has been identified as the representative occurrence in a group of associated occurrences. This mean other records have been detected that seem to relate to this record and this particular record has the most detailed information on the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	53ed1b84-1532-49b3-9d12-3b8ce4124292
Data Resource	South Australian Museum Adelaide provider for OZCAM
Raw Scientific Name	Rattus rattus flavipectus (Milne-Edwards, 1872)
Coordinates	32.8967,21.9631
Related records
Record UUID	b2d6456f-9052-421d-b037-d4547e6ff25f
Data Resource	South Australian Museum Adelaide provider for OZCAM
Raw Scientific Name	Rattus rattus flavipectus (Milne-Edwards, 1872)
Coordinates	32.8967,21.9631

Additional political boundaries information

Political
World Country Boundaries	Libya

Environmental sampling for this location

Biodiversity
Occurrence Density	1.0 frequency
Species Richness	1.0 frequency
Climate
WorldClim 2.1: Precipitation - annual	316.0 mm
WorldClim 2.1: Precipitation - coldest quarter	156.0 mm
WorldClim 2.1: Precipitation - driest month	0.0 mm
WorldClim 2.1: Precipitation - driest quarter	1.0 mm
WorldClim 2.1: Precipitation - seasonality	102.65656 mm
WorldClim 2.1: Precipitation - warmest quarter	5.0 mm
WorldClim 2.1: Precipitation - wettest month	77.0 mm
WorldClim 2.1: Precipitation - wettest quarter	201.0 mm
WorldClim 2.1: Temperature - annual mean	19.75 °C
WorldClim 2.1: Temperature - annual range	20.3 °C
WorldClim 2.1: Temperature - coldest month min	9.8 °C
WorldClim 2.1: Temperature - coldest quarter mean	14.283334 °C
WorldClim 2.1: Temperature - diurnal range mean	8.55 °C
WorldClim 2.1: Temperature - driest quarter mean	25.016666 °C
WorldClim 2.1: Temperature - isothermality	42.11823 %
WorldClim 2.1: Temperature - seasonality	454.84262
WorldClim 2.1: Temperature - warmest month max	30.1 °C
WorldClim 2.1: Temperature - warmest quarter mean	25.166666 °C
WorldClim 2.1: Temperature - wettest quarter mean	14.283334 °C
WorldClim: Temperature - isothermality	45.0 %

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Rattus rattus flavipectus (Milne-Edwards, 1872)	Rattus rattus
	Match type		higherMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/c1817333-9c62-4a05-af03-fe5fb9c9a0ce
	Order	Rodentia	Rodentia
	Infraspecific epithet	flavipectus
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/c1817333-9c62-4a05-af03-fe5fb9c9a0ce
	Genus	Rattus	Rattus
	Left		53578
	Scientific name authorship		(Linnaeus, 1758)
	Taxon rank	species	species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name		Black Rat
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53578
	Kingdom		Animalia
	Specific epithet	tanezumi
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus rattus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Event ID	urn:emu.sam.sa.gov.au:Event:192801
	Year		1962
	End day of year		157
	Month		6
	Date precision		DAY
	Start day of year		157
	Day		6
	Event date	6/06/1962	1962-06-06
Occurrence	Associated occurrences		b2d6456f-9052-421d-b037-d4547e6ff25f
	Individual count	0	0
	Duplication status		R
	Type		PhysicalObject
	Catalog number	ABTC123192.1
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	25/07/2024	2024-07-25
	Relationship of resource	same individual
	Record number	2237
	Collection code	AustralianBiologicalTissueCollection
	Duplicate status		REPRESENTATIVE
	Institution code	SAMA
	Sex	Female	FEMALE
	Disposition	Consumed
	Other catalog numbers	[ecatalogue.irn:540372]
	Dataset ID	[F-ALC]
Attribution	Data resource		South Australian Museum Adelaide provider for OZCAM
	Collection		South Australian Museum Australian Biological Tissue Collection
	License		CC-BY
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr346	dr346
	Institution ID		in22
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		South Australian Museum
	Data hub uid	[dh1]
	Collection ID		co166
Location	Country	Libya	Libya
	Decimal latitude	32.8967	32.8967
	Terrestrial	true	true
	Locality	Apollonia, 27 Km E Apollonia, yrenaica	Apollonia, 27 Km E Apollonia, yrenaica
	Decimal longitude	21.9631	21.9631
	State province	Cyrenaica	Cyrenaica
	Verbatim latitude	32 53 48 N
	Biome		TERRESTRIAL
	Marine	false	false
	Country code		LY
	Verbatim longitude	021 57 47 E
	Geodetic datum		EPSG:4326
	Coordinate precision	0.0001	1.0E-4

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