Occurrence record: DNA Laboratory:Z19378

Material Sample of Rattus lutreolus (J.E. Gray, 1841) | Swamp Rat recorded on 2011-03-28

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z19378
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z19378
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Tissue\|frozen\|Liver, Muscle\|RNALater\|-196°C
Collector	1. Rowe, C. Kevin 2. Museum Victoria Supplied as "Kevin C. Rowe - Museum Victoria"
Sex	Female
Individual count	1
Life stage	adult
Associated Occurrence Status	Associated record
Associated occurrences	The occurrence is associated with a representative record. For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Mammalogy:PreservedSpecimen:C36829
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Relationship of resource	same individual
Owner institution code	NMV
Sampling protocol	[trap]
Associated records	ASSOCIATED
Disposition	In collection

Event

Occurrence date	2011-03-28 Supplied date "2011-03-28T00:00:00\2011-03-28T00:00:00"
Sampling protocol	trap
Date precision	DAY

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
Scientific name	Rattus lutreolus Supplied scientific name "Rattus lutreolus (Gray, 1841)"
Identified to rank	species
Common name	Swamp Rat Supplied common name "Australian Swamp Rat"
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus lutreolus
Name match metric	canonicalMatch
Scientific name authorship	(J.E. Gray, 1841) Supplied as (Gray, 1841)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Higher geography	Australia \| Victoria
Country	Australia
State or Territory	Victoria
Locality	Lake Condah Mission
Latitude	-38.0769 Supplied as: "-38.0769"
Longitude	141.789 Supplied as: "141.789"
Datum	EPSG:4326 Supplied datum: "WGS84"
Verbatim locality	Lake Condah Mission
Coordinate precision	Unknown
Georeference protocol	gps
Terrestrial	true
Biome	TERRESTRIAL
Marine	false
Country Code	AU

Additional properties

blocked	Not available for loan
material sample type	Tissue
preparation materials	RNALater
preparation type	Liver, Muscle
prepared by	Kevin C. Rowe - Museum Victoria
preservation temperature	-196°C
preservation type	RNALater

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Recorded date invalid	Warning
Show/Hide 96 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Individual count conflicts with occurrence status	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeference protocol	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 4 missing properties
Missing georeferenced by	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 22 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record is associated with the representative record. This mean another record has been detected to be similar to this record, and that the other record (the representative record) has the most detailed information for the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	0318e050-232c-4d02-b38b-cd1d7d97cdae
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.0769,141.789
Related records
Record UUID	5c34d114-4633-43dc-814c-0ac6a9dd9ec1
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.0764,141.79
Record UUID	17599c4e-adb6-4a34-bd39-3b7d3e512632
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.0769,141.789
Record UUID	3e4674a3-0b31-48ef-9790-dac54623e4cd
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.0769,141.789
Record UUID	d1f618ea-cf54-42a3-adfd-9ffff9462083
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.0769,141.789
Record UUID	5101d661-8b39-4c22-8137-4d38e8344227
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.0769,141.789
Record UUID	894e75da-7269-4a6a-a2af-a91162a469dc
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-38.0769,141.789

Additional political boundaries information

Area Management
NRM Regions 2010	Glenelg Hopkins
NRM Regions 2017	Glenelg Hopkins
Area management
National Landcare Program Management Units 2018	Glenelg Hopkins
Biodiversity
IBRA 6 Regions	Victorian Volcanic Plain
IBRA 7 Regions	Southern Volcanic Plain
IBRA 7 Subregions	Victorian Volcanic Plain
Hydrology
Drainage Divisions Level 1	South East Coast (Victoria)
Drainage Divisions Level 2	PORTLAND COAST
Marine
States including coastal waters	Victoria (including Coastal Waters)
Political
ASGS Australian States and Territories	Victoria
Australian States and Territories	Victoria
Indigenous Land Use Agreements	Gunditj Mirring and State of Victoria
Local Government Areas 2011	Glenelg (S)
Local Government Areas 2012 deprecated	Glenelg - Heywood
Local Government Areas PSMA 2018	GLENELG SHIRE
National Native Title Register (NNTR, Determinations of Native Title) - boundaries and core attributes	Gunditjmara - Part A
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	26
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	721
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF VIC.
PSMA ABS SA2 Statistical Areas (2016)	GLENELG (VIC.)
PSMA ABS SA3 Statistical Areas (2016)	GLENELG - SOUTHERN GRAMPIANS
PSMA ABS SA4 Statistical Areas (2016)	WARRNAMBOOL AND SOUTH WEST
PSMA Commonwealth Electoral Boundaries (2018)	WANNON
PSMA Indigenous Areas (2016)	SOUTHERN GRAMPIANS - GLENELG
PSMA Indigenous Locations (2016)	GLENELG NORTH - HEYWOOD
PSMA Indigenous Regions (2016)	VICTORIA EXC. MELBOURNE
PSMA Remoteness Areas (2016)	Outer Regional Australia
PSMA State Electoral Boundaries (2018)	WESTERN VICTORIA
PSMA States (2016)	VICTORIA
World Country Boundaries	Australia
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Indigenous owned, Native forest
Forests of Australia (2013) v2.0	Eucalypt Medium Woodland
Forests of Australia 2018B	Eucalypt Medium Woodland
NVIS 4.1 Major Vegetation Groups	Eucalypt Open Forests
NVIS 4.1 Major Vegetation Subgroups	Eucalyptus tall open forests and open forests with ferns, herbs, sedges, rushes or wet tussock grasses
Tenure of Australia's forests (2013) v2.0	Private Freehold
Vegetation types - native	Eucalypt woodlands
Vegetation types - present	cleared, non-native vegetation, buildings

Environmental sampling for this location

Climate
Precipitation - annual (Bio12)	705.0 mm
Precipitation - coldest quarter (Bio19)	258.0 mm
Precipitation - driest period (Bio14)	5.0 mm
Precipitation - driest quarter (Bio17)	94.0 mm
Precipitation - seasonality (Bio15)	37.0 mm
Precipitation - warmest quarter (Bio18)	94.0 mm
Precipitation - wettest period (Bio13)	22.0 mm
Precipitation - wettest quarter (Bio16)	259.0 mm
Radiation - annual mean (Bio20)	15.3 MJ/m2/day
Radiation - seasonality (Bio23)	46.0
Radiation - warmest quarter (Bio26)	23.2 MJ/m2/day
Temperature - annual mean (Bio01)	13.9 degrees C
Temperature - annual range (Bio07)	19.8 degrees C
Temperature - coldest period min (Bio06)	5.4 degrees C
Temperature - coldest quarter mean (Bio11)	10.1 degrees C
Temperature - diurnal range mean (Bio02)	10.3 degrees C
Temperature - driest quarter mean (Bio09)	18.0 degrees C
Temperature - isothermality (Bio03)	0.52 %
Temperature - seasonality (Bio04)	1.07
Temperature - warmest period max (Bio05)	25.1 degrees C
Temperature - warmest quarter (Bio10)	18.0 degrees C
Temperature - wettest quarter mean (Bio08)	10.2 degrees C
WorldClim 2.1: Temperature - annual mean	13.645833 °C
WorldClim: Temperature - isothermality	52.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.65
Moisture Index - highest quarter mean (Bio32)	1.0
Elevation	48.0 m

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Rattus lutreolus (Gray, 1841)	Rattus lutreolus
	Match type		canonicalMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/2910ea05-7539-434c-bcc8-ca48d038b82b
	Order	Rodentia	Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/2910ea05-7539-434c-bcc8-ca48d038b82b
	Genus	Rattus	Rattus
	Left		53550
	Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
	Scientific name authorship	(Gray, 1841)	(J.E. Gray, 1841)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name	Australian Swamp Rat	Swamp Rat
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53556
	Kingdom	Animalia	Animalia
	Specific epithet	lutreolus
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus lutreolus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Year	2011	2011
	Month	3	3
	Date precision		DAY
	Day	28	28
	Event date	2011-03-28T00:00:00\2011-03-28T00:00:00	2011-03-28
Occurrence	Associated occurrences		0318e050-232c-4d02-b38b-cd1d7d97cdae
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Individual count	1	1
	Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Mammalogy:PreservedSpecimen:C36829
	Duplication status		D
	Language	en
	Type		PhysicalObject
	Catalog number	Z19378
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2023-10-19T13:07:00	2023-10-19T13:07
	Relationship of resource	same individual
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z19378
	Owner institution code	NMV
	Sampling protocol	[trap]
	Preparations	Tissue\|frozen\|Liver, Muscle\|RNALater\|-196°C
	Duplicate status		ASSOCIATED
	Institution code	NMV
	Sex	Female	FEMALE
	Disposition	In collection
	Recorded by	Kevin C. Rowe - Museum Victoria	[Rowe, C. Kevin, Museum Victoria]
	Life stage	adult	{"concept": "Adult", "lineage": ["Adult"]}
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Decimal latitude	-38.0769	-38.0769
	Terrestrial	true	true
	Higher geography	Australia \| Victoria
	Locality	Lake Condah Mission	Lake Condah Mission
	Decimal longitude	141.789	141.789
	State province	Victoria	Victoria
	Verbatim locality	Lake Condah Mission
	Biome		TERRESTRIAL
	Lga	Glenelg (S)
	Marine	false	false
	Country code		AU
	Georeference protocol	gps
	Geodetic datum	WGS84	EPSG:4326

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