Occurrence record: DNA Laboratory:Z21253

Material Sample of Rattus villosissimus (Waite, 1898) | Long-haired Rat recorded on 2011-07-12

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z21253
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z21253
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Tissue\|Frozen\|RNALater\|Liver\|RNAlater\|-196°C
Identified by	Kevin C. Rowe - Museum Victoria
Collector	1. Rowe, C. Kevin 2. Museum Victoria 3. Rowe, M.C. Karen 4. Museums Victoria Supplied as "Kevin C. Rowe - Museum Victoria \| Karen M.C. Rowe - Museums Victoria"
Sex	Female
Individual count	1
Life stage	adult
Associated Occurrence Status	Associated record
Associated occurrences	The occurrence is associated with a representative record. For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Mammalogy:PreservedSpecimen:C36851
Language	en
Type	PhysicalObject
Presence/Absence	PRESENT Supplied as present
Relationship of resource	same individual
Owner institution code	NMV
Sampling protocol	[Elliott trap]
Associated records	ASSOCIATED
Dataset / Survey name	[2011 Northern Territory]
Disposition	In collection

Event

Dataset / Survey name	2011 Northern Territory
Occurrence date	2011-07-12 Supplied date "2011-07-12T00:00:00\2011-07-12T00:00:00"
Sampling protocol	Elliott trap
Date precision	DAY

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
Scientific name	Rattus villosissimus
Identified to rank	species
Common name	Long-haired Rat Supplied common name "Australian Long-haired Rat"
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus villosissimus
Name match metric	exactMatch
Scientific name authorship	(Waite, 1898)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Higher geography	Australia \| Northern Territory
Country	Australia
State or Territory	Northern Territory
Locality	Finke River, New Crown Station, 163 km E, 11 km N of Kulgera at Stuart Highway and Finke Road intersection
Latitude	-25.7337 Supplied as: "-25.7337"
Longitude	134.918 Supplied as: "134.918"
Datum	EPSG:4326 Supplied datum: "WGS84"
Verbatim locality	Finke River, New Crown Station, 163 km E, 11 km N of Kulgera at Stuart Highway and Finke Road intersection
Min elevation	207
Max elevation	214
Coordinate precision	Unknown
Georeference sources	Collector
Georeference protocol	Garmin GPSmap 62s
Georeferenced by	Kevin C. Rowe - Museum Victoria
Terrestrial	true
Biome	TERRESTRIAL
Marine	false
Country Code	AU

Additional properties

blocked	Not available for loan
material sample type	Tissue
preparation materials	RNALater \| RNAlater
preparation type	Liver
prepared by	Kevin C. Rowe - Museum Victoria
preservation date begin	2011-07-12T00:00:00
preservation temperature	-196°C
preservation type	RNALater \| RNAlater

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Recorded date invalid	Warning
Show/Hide 102 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
Min and max altitude reversed	Passed
Altitude value non-numeric	Passed
Altitude value supplied in feet	Passed
Elevation unlikely	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Individual count conflicts with occurrence status	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeferenced by	Passed
Missing georeference protocol	Passed
Missing georeference sources	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 2 missing properties
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 18 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record is associated with the representative record. This mean another record has been detected to be similar to this record, and that the other record (the representative record) has the most detailed information for the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	06c7072c-e633-4511-b2e3-bf99fddf4f31
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Related records
Record UUID	255fbbe9-a03a-4e73-be47-22c35fa1b7fc
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	dfbc9f5d-1549-4928-9b4f-621b5560e6fe
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	55b228e2-8494-4572-957f-2d089b5e24a3
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	08a48a42-4585-413a-950f-6dd453c37e2b
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	b1712ef5-65d3-4021-bd65-1b192fa98064
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	a12f7fcb-029a-4087-b965-4c1662cdd1ce
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	a04827bd-0cea-45fe-b931-654c0d84f889
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	e5eb9212-17d1-450c-8bc5-a5b6d6edd938
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	3c70cfb3-0f6a-4d19-91e8-3719132af77e
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918
Record UUID	8e329755-d087-434e-a585-5069ea14dedc
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus villosissimus
Coordinates	-25.7337,134.918

Additional political boundaries information

Area Management
NRM Regions 2010	North West
NRM Regions 2017	North West NRM Region
Area management
National Landcare Program Management Units 2018	North West NRM Region
Biodiversity
IBRA 6 Regions	Tasmanian Central Highlands
IBRA 7 Regions	Tasmanian Central Highlands
IBRA 7 Subregions	Central Highlands
Hydrology
Drainage Divisions Level 1	Tasmania
Drainage Divisions Level 2	PIEMAN RIVER
Marine
States including coastal waters	Tasmania (including Coastal Waters)
Political
ASGS Australian States and Territories	Tasmania
Australian States and Territories	Tasmania
Local Government Areas 2011	Waratah/Wynyard (M)
Local Government Areas 2012 deprecated	Waratah/Wynyard - Pt B
Local Government Areas PSMA 2018	WARATAH-WYNYARD COUNCIL
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	3
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	3932
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF TAS.
PSMA ABS SA2 Statistical Areas (2016)	WARATAH
PSMA ABS SA3 Statistical Areas (2016)	WEST COAST
PSMA ABS SA4 Statistical Areas (2016)	WEST AND NORTH WEST
PSMA Commonwealth Electoral Boundaries (2018)	BRADDON
PSMA Indigenous Areas (2016)	TASMANIA - WEST COAST
PSMA Indigenous Locations (2016)	WARATAH
PSMA Indigenous Regions (2016)	TASMANIA
PSMA Remoteness Areas (2016)	Outer Regional Australia
PSMA State Electoral Boundaries (2018)	MURCHISON
PSMA States (2016)	TASMANIA
World Country Boundaries	Australia
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Non-Indigenous, Native forest
Forests of Australia (2013) v2.0	Rainforest
Forests of Australia 2018B	Hardwood plantation
NVIS 4.1 Major Vegetation Groups	Cleared, non-native vegetation, buildings
NVIS 4.1 Major Vegetation Subgroups	Cleared, non-native vegetation, buildings
Tenure of Australia's forests (2013) v2.0	Private Freehold
Vegetation types - native	Eucalypt tall open forests
Vegetation types - present	Eucalyptus tall open forest

Environmental sampling for this location

Climate
Precipitation - annual (Bio12)	1892.0 mm
Precipitation - coldest quarter (Bio19)	664.0 mm
Precipitation - driest period (Bio14)	18.0 mm
Precipitation - driest quarter (Bio17)	280.0 mm
Precipitation - seasonality (Bio15)	32.0 mm
Precipitation - warmest quarter (Bio18)	283.0 mm
Precipitation - wettest period (Bio13)	62.0 mm
Precipitation - wettest quarter (Bio16)	670.0 mm
Radiation - annual mean (Bio20)	11.7 MJ/m2/day
Radiation - seasonality (Bio23)	54.0
Radiation - warmest quarter (Bio26)	18.6 MJ/m2/day
Temperature - annual mean (Bio01)	8.3 degrees C
Temperature - annual range (Bio07)	17.5 degrees C
Temperature - coldest period min (Bio06)	1.1 degrees C
Temperature - coldest quarter mean (Bio11)	4.5 degrees C
Temperature - diurnal range mean (Bio02)	8.2 degrees C
Temperature - driest quarter mean (Bio09)	12.3 degrees C
Temperature - isothermality (Bio03)	0.47 %
Temperature - seasonality (Bio04)	1.09
Temperature - warmest period max (Bio05)	18.6 degrees C
Temperature - warmest quarter (Bio10)	12.3 degrees C
Temperature - wettest quarter mean (Bio08)	4.6 degrees C
WorldClim 2.1: Temperature - annual mean	8.3375 °C
WorldClim: Temperature - isothermality	48.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.99
Moisture Index - highest quarter mean (Bio32)	1.0
Elevation	719.0 m

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Rattus villosissimus	Rattus villosissimus
	Match type		exactMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/cbaf1515-df15-49ec-be06-36058183644b
	Order	Rodentia	Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/cbaf1515-df15-49ec-be06-36058183644b
	Genus	Rattus	Rattus
	Left		53580
	Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
	Scientific name authorship		(Waite, 1898)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name	Australian Long-haired Rat	Long-haired Rat
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53580
	Kingdom	Animalia	Animalia
	Specific epithet	villosissimus
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus villosissimus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Year	2011	2011
	Dataset / Survey name	[2011 Northern Territory]
	Month	7	7
	Date precision		DAY
	Day	12	12
	Event date	2011-07-12T00:00:00\2011-07-12T00:00:00	2011-07-12
Identification	Identified by	[Kevin C. Rowe - Museum Victoria]
Occurrence	Associated occurrences		06c7072c-e633-4511-b2e3-bf99fddf4f31
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Individual count	1	1
	Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Mammalogy:PreservedSpecimen:C36851
	Duplication status		D
	Language	en
	Type		PhysicalObject
	Catalog number	Z21253
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2020-09-28T17:24:00	2020-09-28T17:24
	Relationship of resource	same individual
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z21253
	Owner institution code	NMV
	Sampling protocol	[Elliott trap]
	Preparations	Tissue\|Frozen\|RNALater\|Liver\|RNAlater\|-196°C
	Duplicate status		ASSOCIATED
	Institution code	NMV
	Sex	Female	FEMALE
	Dataset / Survey name	[2011 Northern Territory]
	Disposition	In collection
	Recorded by	Kevin C. Rowe - Museum Victoria \| Karen M.C. Rowe - Museums Victoria	[Rowe, C. Kevin, Museum Victoria, Rowe, M.C. Karen, Museums Victoria]
	Life stage	adult	{"concept": "Adult", "lineage": ["Adult"]}
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Decimal latitude	-25.7337	-25.7337
	Terrestrial	true	true
	Higher geography	Australia \| Northern Territory
	Georeferenced by	Kevin C. Rowe - Museum Victoria
	Locality	Finke River, New Crown Station, 163 km E, 11 km N of Kulgera at Stuart Highway and Finke Road intersection	Finke River, New Crown Station, 163 km E, 11 km N of Kulgera at Stuart Highway and Finke Road intersection
	Minimum elevation in meters	207	207.0
	Decimal longitude	134.918	134.918
	State province	Northern Territory	Northern Territory
	Verbatim locality	Finke River, New Crown Station, 163 km E, 11 km N of Kulgera at Stuart Highway and Finke Road intersection
	Maximum elevation in meters	214	214.0
	Biome		TERRESTRIAL
	Lga	MacDonnell (S)
	Marine	false	false
	Country code		AU
	Georeference protocol	Garmin GPSmap 62s
	Geodetic datum	WGS84	EPSG:4326
	Georeference sources	Collector

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