Occurrence record: DNA Laboratory:Z62470

Material Sample of Thinornis cucullatus (Vieillot, 1818) | Hooded Plover recorded on 2010-03-04

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z62470
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z62470
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Tissue\|frozen\|Liver\|ethanol 70%\|-196°C
Identified by	Dr Grainne Maguire - BirdLife Australia
Identified date	04/03/2010
Collector	Quinn, Mick Supplied as "Mick Quinn - BirdLife Australia"
Sex	Female
Individual count	1
Life stage	adult
Associated Occurrence Status	Representative record
Associated occurrences	This record has 1 inferred associated occurrences For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Ornithology:PreservedSpecimen:B34797
Language	en
Presence/Absence	PRESENT Supplied as present
Relationship of resource	same individual
Owner institution code	NMV
Sampling protocol	[salvage]
Associated records	REPRESENTATIVE
Disposition	In collection
State conservation	Victoria: Vulnerable Supplied as Vulnerable
Date identified	2010-03-04 Supplied as 04/03/2010

Event

Occurrence date	2010-03-04 Supplied date "2010-03-04T14:00:00\2010-03-04T14:00:00"
Sampling protocol	salvage
Date precision	DAY
Event time	14:00:00\14:00:00

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Aves \| Charadriiformes \| Charadriidae
Scientific name	Thinornis cucullatus Supplied scientific name "Thinornis rubricollis"
Identified to rank	species
Common name	Hooded Plover
Kingdom	Animalia
Phylum	Chordata
Class	Aves
Order	Charadriiformes
Family	Charadriidae
Genus	Thinornis
Species	Thinornis cucullatus
Name match metric	exactMatch
Scientific name authorship	(Vieillot, 1818)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Higher geography	Australia \| Victoria
Country	Australia
State or Territory	Victoria
Locality	Logans Beach
Latitude	-38.4093 Supplied as: "-38.4093"
Longitude	142.537 Supplied as: "142.537"
Datum	EPSG:4326 Supplied datum: "WGS84"
Verbatim locality	Logans Beach
Coordinate precision	Unknown
Georeference sources	data provided with specimen(s)
Georeferenced by	Mick Quinn - BirdLife Australia
Municipality	Warrnambool
Terrestrial	true
Georeferenced date	2010-03-04T00:00 Supplied as 2010-03-04T00:00:00
Biome	TERRESTRIAL
Marine	false
Country Code	AU

Additional properties

blocked	Available for loan
material sample type	Tissue
preparation materials	ethanol 70%
preparation type	Liver
prepared by	Kym Haines - Museum Victoria
preservation date begin	2017-12-20T00:00:00
preservation temperature	-196°C
preservation type	ethanol 70%

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Recorded date invalid	Warning
Show/Hide 102 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced date invalid	Passed
Georeferenced date unlikely	Passed
Georeferenced after occurrence date	Passed
Identified date invalid	Passed
Identified date unlikely	Passed
Identification date before occurrence date	Passed
Individual count conflicts with occurrence status	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeferenced by	Passed
Missing georeference sources	Passed
Missing georeference date	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 2 missing properties
Missing georeference protocol	Missing
Missing georeference verification status	Missing
Show/Hide 18 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record has been identified as the representative occurrence in a group of associated occurrences. This mean other records have been detected that seem to relate to this record and this particular record has the most detailed information on the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	02d4b652-0958-4e28-8623-1addeaa427b2
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Thinornis rubricollis
Coordinates	-38.4093,142.537
Related records
Record UUID	3a25930e-ee94-4567-a2fe-7911ee0eb9a4
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Thinornis rubricollis
Coordinates	-38.4093,142.537

Additional political boundaries information

Area Management
NRM Regions 2010	Glenelg Hopkins
NRM Regions 2017	Glenelg Hopkins
Area management
National Landcare Program Management Units 2018	Glenelg Hopkins
Biodiversity
IBRA 6 Regions	South East Coastal Plain
IBRA 7 Regions	South East Coastal Plain
IBRA 7 Subregions	Warrnambool Plain
Hydrology
Drainage Divisions Level 1	South East Coast (Victoria)
Drainage Divisions Level 2	HOPKINS RIVER
Marine
States including coastal waters	Victoria (including Coastal Waters)
Political
ASGS Australian States and Territories	Victoria
Australian States and Territories	Victoria
Local Government Areas 2011	Warrnambool (C)
Local Government Areas 2012 deprecated	Warrnambool
Local Government Areas PSMA 2018	WARRNAMBOOL CITY
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	8
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	558
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF VIC.
PSMA ABS SA2 Statistical Areas (2016)	WARRNAMBOOL - SOUTH
PSMA ABS SA3 Statistical Areas (2016)	WARRNAMBOOL
PSMA ABS SA4 Statistical Areas (2016)	WARRNAMBOOL AND SOUTH WEST
PSMA Commonwealth Electoral Boundaries (2018)	WANNON
PSMA Indigenous Areas (2016)	WARRNAMBOOL
PSMA Indigenous Locations (2016)	WARRNAMBOOL
PSMA Indigenous Regions (2016)	VICTORIA EXC. MELBOURNE
PSMA Remoteness Areas (2016)	Inner Regional Australia
PSMA State Electoral Boundaries (2018)	WESTERN VICTORIA
PSMA States (2016)	VICTORIA
World Country Boundaries	Australia
Vegetation
Forests of Australia 2018B	Non forest
Vegetation types - native	Eucalypt woodlands
Vegetation types - present	cleared, non-native vegetation, buildings

Environmental sampling for this location

Climate
Precipitation - annual (Bio12)	790.0 mm
Precipitation - coldest quarter (Bio19)	289.0 mm
Precipitation - driest period (Bio14)	7.0 mm
Precipitation - driest quarter (Bio17)	114.0 mm
Precipitation - seasonality (Bio15)	34.0 mm
Precipitation - warmest quarter (Bio18)	115.0 mm
Precipitation - wettest period (Bio13)	25.0 mm
Precipitation - wettest quarter (Bio16)	289.0 mm
Radiation - annual mean (Bio20)	14.9 MJ/m2/day
Radiation - seasonality (Bio23)	47.0
Radiation - warmest quarter (Bio26)	22.7 MJ/m2/day
Temperature - annual mean (Bio01)	13.9 degrees C
Temperature - annual range (Bio07)	18.3 degrees C
Temperature - coldest period min (Bio06)	5.7 degrees C
Temperature - coldest quarter mean (Bio11)	10.2 degrees C
Temperature - diurnal range mean (Bio02)	9.5 degrees C
Temperature - driest quarter mean (Bio09)	17.7 degrees C
Temperature - isothermality (Bio03)	0.52 %
Temperature - seasonality (Bio04)	1.02
Temperature - warmest period max (Bio05)	23.9 degrees C
Temperature - warmest quarter (Bio10)	17.7 degrees C
Temperature - wettest quarter mean (Bio08)	10.2 degrees C
Substrate
Moisture Index - annual mean (Bio28)	0.69
Moisture Index - highest quarter mean (Bio32)	1.0
Elevation	10.0 m

Group	Field Name	Original Value	Processed Value
Classification	Scientific name	Thinornis rubricollis	Thinornis cucullatus
	Match type		exactMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/509cd85d-bcf8-48b1-b2c3-7e8415950109
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/1ebf8ec6-9aee-4b58-8789-0be73eb97b2f
	Order	Charadriiformes	Charadriiformes
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/1ebf8ec6-9aee-4b58-8789-0be73eb97b2f
	Genus	Thinornis	Thinornis
	Left		32224
	Higher classification	Animalia \| Chordata \| Vertebrata \| Aves \| Charadriiformes \| Charadriidae
	Scientific name authorship		(Vieillot, 1818)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/61ad6012-e658-483b-9cbc-0ead0934fd86
	Name type		SCIENTIFIC
	Vernacular name	Hooded Plover	Hooded Plover
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/963a4568-f461-4e6b-bfec-7a4fd9be4fd8
	Right		32228
	Kingdom	Animalia	Animalia
	Specific epithet	rubricollis
	Class id		https://biodiversity.org.au/afd/taxa/65625205-db74-4a87-b566-ca387b119974
	Phylum	Chordata	Chordata
	Class	Aves	Aves
	Species		Thinornis cucullatus
	Family	Charadriidae	Charadriidae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Year	2010	2010
	Month	3	3
	Date precision		DAY
	Event time	14:00:00\14:00:00
	Day	4	4
	Event date	2010-03-04T14:00:00\2010-03-04T14:00:00	2010-03-04
Identification	Date identified	04/03/2010	2010-03-04
Identification	Identified by	[Dr Grainne Maguire - BirdLife Australia]
Occurrence	Associated occurrences		3a25930e-ee94-4567-a2fe-7911ee0eb9a4
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Individual count	1	1
	Related resource id	urn:lsid:ozcam.taxonomy.org.au:NMV:Ornithology:PreservedSpecimen:B34797
	Duplication status		R
	Language	en
	Type		PhysicalObject
	Catalog number	Z62470
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2020-09-28T16:16:00	2020-09-28T16:16
	Relationship of resource	same individual
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z62470
	Owner institution code	NMV
	Sampling protocol	[salvage]
	Preparations	Tissue\|frozen\|Liver\|ethanol 70%\|-196°C
	Duplicate status		REPRESENTATIVE
	Institution code	NMV
	Sex	Female	FEMALE
	Disposition	In collection
	Recorded by	Mick Quinn - BirdLife Australia	[Quinn, Mick]
	Life stage	adult	{"concept": "Adult", "lineage": ["Adult"]}
	State conservation	Vulnerable	<a href="https://lists.ala.org.au/speciesListItem/list/dr655" target="_lists">Victoria: Vulnerable</a>
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Municipality	Warrnambool
	Decimal latitude	-38.4093	-38.4093
	Terrestrial	true	true
	Georeferenced date	2010-03-04T00:00:00	2010-03-04T00:00
	Higher geography	Australia \| Victoria
	Georeferenced by	Mick Quinn - BirdLife Australia
	Locality	Logans Beach	Logans Beach
	Decimal longitude	142.537	142.537
	State province	Victoria	Victoria
	Verbatim locality	Logans Beach
	Biome		TERRESTRIAL
	Lga	Warrnambool (C)
	Marine	false	false
	Country code		AU
	Geodetic datum	WGS84	EPSG:4326
	Georeference sources	data provided with specimen(s)

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